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"Connectivity matrix method for analyses of biological networks and its application to atom-level analysis of a model network of carbohydrate metabolism" by Jun Ohta.
IEE Proceedings Systems Biology 153(5), 372-374 (2006)
PMID: 16986320

Supplemental information and scripts or functions
  • July 6, 2017 version: [zip] In the file, btk_route.m, explanation was enhanced and bugs related to "error" command were fixed.
  • June 12, 2017 version: [zip] To obey the IUPAC rule, the indices of 2 carbon atoms in dihydroxyacetone phosphate were changed. The modifications resulted in some changes of the files, btk_connectivity_matrix and btk_connectivity_matrix.mat, but did not affect the other files.
  • March 8, 2017 version: [zip] Errata in the map were corrected and reversibilities of processes were modified. A script and a function were updated.
  • March 2, 2006 version: [tar.gz] [zip] Original version


  • This page is maintained by Jun Ohta, M.D.& Ph.D., Metabolism Group.
    E-mail:  jo25@md.okayama-u.ac.jp
    Okayama University Graduate School of Medicine, Dentistry and Pharmaceutical Sciences
    Okayama University Medical School
    All Rights Reserved. Copyright (c) 2003-2017 Jun Ohta and Metabolism Group