Publications
ケイくん

Nemoto Lab

岡山大学大学院　環境生命自然科学研究科

Graduate School of Environmental, Life, Natural Science and Technology
Okayama University
ソウちゃん

(*, corresponding author)

2024

  1. The Multiphasic Teeth of Chiton Articulatus, an Abrasion-Resistant and Self-Sharpening Tool for Hard Algae Collection. Devis Montroni, Ezra Sarmiento, Ruoheng Zhao, Phani Saketh Dasika,John Michael Connolly, Richard Wuhrer, Yugang Zhang, Mikhail Zhernenkov,Taifeng Wang, Brenda Paola Ramirez-Santana, Leigh Sheppard,Omar Hernando Avila-Poveda, Atsushi Arakaki, Michiko Nemoto, Pablo Zavattieri,and David Kisailus* Advanced Functional Materials 34, 2401658 (2024)

2023

  1. Nuclear transformation of the marine pennate diatom Nitzschia sp. strain NIES-4635 by multi-pulse electroporation. Koki Okada, Yu Morimoto, Yukine Shiraishi, Takashi Tamura, Shigeki Mayama, Takashi Kadono, Masao Adachi, Kentaro Ifuku, Michiko Nemoto*, Marine Biotechnology 25, 1208–1219. (2023)
  2. オミクス解析に基づく生体鉱物形成関連タンパク質の同定. 根本理子*，化学と生物，61，439 – 444. 2023年9月
  3. 生物界最強の歯をもつ貝とは？根本理子*，貝の疑問50（日本貝類学会編），pp．53‐55，成山堂書店，東京. 2023年4月 (ISBN: 9784425984213)

2022

  1. Fibrous anisotropy and mineral gradients Within the radula stylus of chiton: Controlled stiffness and damage tolerance in a flexible biological composite. Jung-Eun Lee, John Connolloy, Wen Yang, Guillaume Freychet, Taifeng Wang, Steven A. Herrera, Satoshi Murata, Phani Saketh Dasika, Devis Montroni, Anna Pohl, Chenhui Zhu, Mikhail Zhernenkov, Richard Wuhrer, Leigh Sheppard, Michiko Nemoto, Atsushi Arakaki, Pablo Zavattieri, David Kisailus*, JOURNAL OF COMPOSITE MATERIALS (2022)
  2. Evaluation of the Geenius HIV 1/2 confirmatory assay for HIV-2 samples isolated in Japan. Urara Shigemi, Yoshimi Yamamura, Masakazu Matsuda, Reiko Okazaki, Mai Kubota, Shiro Ibe, Michiko Nemoto, Masami Maejima-Kitagawa, Sayaka Sukegawa, Mayumi Imahashi, Tadashi Kikuchi, Wataru Sugiura, Yasumasa Iwatani, Atsuko Hachiya*, Yoshiyuki Yokomaku ; Japanese Drug Resistance HIV-1 Surveillance Network, Journal of Clinical Virology 152 105189-105189 (2022)
  3. Nanoarchitected Tough Biological Composites from Assembled Chitinous Scaffolds. Wei Huang, Devis Montroni, Taifeng Wang, Satoshi Murata, Atsushi Arakaki, Michiko Nemoto, David Kisailus*, ACCOUNTS OF CHEMICAL RESEARCH 55(10) 1360-1371 (2022)
  4. Mesocrystalline Ordering and Phase Transformation of Iron Oxide Biominerals in the Ultrahard Teeth of Cryptochiton stelleri. Taifeng Wang, Wei Huang, Cong Huy Pham, Satoshi Murata, Steven Herrera, Nathan D. Kirchhofer, Bassim Arkook, Dejan Stekovic, Mikhail E. Itkis, Nir Goldman, Luis Zepeda-Ruiz, Mikhail Zhernenkov, Michiko Nemoto, Atsushi Arakaki, David Kisailus*. SMALL STRUCTURES 3(4) (2022)

2021

  1. 遺伝子比較解析による珪藻類特異的なSETドメインタンパク質ファミリーの同定. 根本理子*,岡山大学農学部学術報告, 110, 1-6.
  2. Multiple mutations in RNA polymerase β-subunit gene (rpoB) in Streptomyces incarnatus NRRL8089 enhance production of antiviral antibiotic sinefungin: modeling rif cluster region by density functional theory. Saori Ogawa, Hitomi Shimidzu, Koji Fukuda, Naoki Tsunekawa, Toshiyuki Hirano, Fumitoshi Sato, Kei Yura, Tomohisa Hasunuma, Kozo Ochi, Michio Yamamoto, Wataru Sakamoto, Kentaro Hashimoto, Hiroyuki Ogata, Tadayoshi Kanao, Michiko Nemoto, Kenji Inagaki, Takashi Tamura*, Bioscience, biotechnology, and biochemistry (2021)
  3. Impact of long-term antiretroviral therapy on gut and oral microbiotas in HIV-1-infected patients. Mayumi Imahashi, Hirotaka Ode, Ayumi Kobayashi, Michiko Nemoto, Masakazu Matsuda, Chieko Hashiba, Akiko Hamano, Yoshihiro Nakata, Mikiko Mori, Kento Seko, Masashi Nakahata, Ayumi Kogure, Yasuhito Tanaka, Wataru Sugiura, Yoshiyuki Yokomaku, Yasumasa Iwatani*, Scientific reports 11(1) 960-960 (2021)

2020

  1. ヒザラガイ歯舌の磁鉄鉱形成メカニズム. 根本理子*, David Kisailus　月刊地球 (2020年10月号)
  2. Radular stylus of Cryptochiton stelleri: A multifunctional lightweight and flexible fiber-reinforced composite. Anna Pohl, Steven A Herrera, David Restrepo, Ryo Negishi, Jae-Young Jung, Chris Salinas, Richard Wuhrer, Tomoko Yoshino, Joanna McKittrick, Atsushi Arakaki, Michiko Nemoto, Pablo Zavattieri, David Kisailus*, Journal of the mechanical behavior of biomedical materials 111 103991-103991 (2020)
  3. Comparative Gene Analysis Focused on Silica Cell Wall Formation: Identification of Diatom-Specific SET Domain Protein Methyltransferases. Michiko Nemoto*, Sayako Iwaki, Hisao Moriya, Yuki Monden, Takashi Tamura, Kenji Inagaki, Shigeki Mayama, Kiori Obuse, Marine biotechnology (New York, N.Y.) (2020)

2019

  1. Antiviral effect of sinefungin on in vitro growth of feline herpesvirus type 1. Yudai Kuroda, Haruka Yamagata, Michiko Nemoto, Kenji Inagaki, Takashi Tamura*, Ken Maeda, The Journal of antibiotics 72(12) 981-985 (2019)
  2. Redox-tuning of oxidizing disulfide oxidoreductase generates a potent disulfide isomerase. Shinya Sutoh, Yuko Uemura, Yuko Yamaguchi, Asako Kiyotou, Rena Sugihara, Makiko Nagayasu, Mihoko Kurokawa, Koreaki Ito, Naoki Tsunekawa, Michiko Nemoto, Kenji Inagaki, Takashi Tamura*, Biochimica et biophysica acta. Proteins and proteomics 1867(3) 194-201 (2019)
  3. Integrated transcriptomic and proteomic analyses of a molecular mechanism of radular teeth biomineralization in Cryptochiton stelleri. Michiko Nemoto*, Dongni Ren, Steven Herrera, Songqin Pan, Takashi Tamura, Kenji Inagaki, David Kisailus*, Scientific reports 9(1) 856-856 (2019)

2018

  1. Novel Compound Heterozygous TYK2 Mutations in Primary Immunodeficiency with T-Cell Lymphopenia, Hattori Hiroyoshi, Nemoto Michiko, Maeda Naoko, Akita Nobuhiro, Moritani Suzuko, Muramatsu Hideki, Kawasaki Tomonori, Maejima Masami, Ode Hirotaka, Hachiya Atsuko, Sugiura Wataru, Yokomaku Yoshiyuki, Iwatani Yasumasa, Horibe Keizo, PEDIATRIC BLOOD & CANCER 65 S45 (2018)
  2. Structural and proteomic analyses of iron oxide biomineralization in chiton teeth, David Kisailus*, Michiko Nemoto, Biological Magnetic Materials and Applications, Springer Singapore (2018)
  3. Compound heterozygous TYK2 mutations underlie primary immunodeficiency with T-cell lymphopenia. Michiko Nemoto, Hiroyoshi Hattori*, Naoko Maeda, Nobuhiro Akita, Hideki Muramatsu, Suzuko Moritani, Tomonori Kawasaki, Masami Maejima, Hirotaka Ode, Atsuko Hachiya, Wataru Sugiura, Yoshiyuki Yokomaku, Keizo Horibe, Yasumasa Iwatani*, Scientific reports 8(1) 6956-6956 (2018)

2017

  1. An Internal Sequence Region Catalytically Essential for the Human Selenophosphate Synthetase 2, Muneaki Takahata, Michiko Nemoto, Kenji Inagaki, Takashi Tamura
    FREE RADICAL BIOLOGY AND MEDICINE 112 65-65 (2017)
  2. 化学と生物 <今日の話題> ヒザラガイの磁鉄鉱形成メカニズム, 根本 理子*
    日本農芸化学会 2017年10月
  3. Gene cloning, recombinant expression, purification and characterization of l-methionine decarboxylase from Streptomyces sp. 590. Masaya Hayashi, Akane Okada, Kumiko Yamamoto, Tomomi Okugochi, Chika Kusaka, Daizou Kudou, Michiko Nemoto, Junko Inagaki, Yuu Hirose, Toshihide Okajima, Takashi Tamura, Kenji Soda, Kenji Inagaki*, Journal of biochemistry 161(4) 389-398 (2017)

2016

  1. A non-radioactive assay for selenophosphate synthetase activity using recombinant pyruvate pyrophosphate dikinase from Thermus thermophilus HB8. Saho Kamada, Takahiro Okugochi, Kaori Asano, Ryuta Tobe, Hisaaki Mihara, Michiko Nemoto, Kenji Inagaki, Takashi Tamura*, Bioscience, biotechnology, and biochemistry 80(10) 1970-2 (2016)
  2. Molecular evolution of gas cavity in [NiFeSe] hydrogenases resurrected in silico. Takashi Tamura*, Naoki Tsunekawa, Michiko Nemoto, Kenji Inagaki, Toshiyuki Hirano, Fumitoshi Sato, Scientific reports 6 19742-19742 (2016)
  3. Structural Insights into HIV-1 Vif-APOBEC3F Interaction. Masaaki Nakashima, Hirotaka Ode, Takashi Kawamura, Shingo Kitamura, Yuriko Naganawa, Hiroaki Awazu, Shinya Tsuzuki, Kazuhiro Matsuoka, Michiko Nemoto, Atsuko Hachiya, Wataru Sugiura, Yoshiyuki Yokomaku, Nobuhisa Watanabe, Yasumasa Iwatani*, Journal of virology 90(2) 1034-47 (2016)
  4. Identification and characterization of the zosA gene involved in copper uptake in Bacillus subtilis 168. Takahiro Fukuhara, Kazuo Kobayashi, Yousuke Kanayama, Shu-ichi Enomoto, Taeko Kondo, Naoki Tsunekawa, Michiko Nemoto, Naotake Ogasawara, Kenji Inagaki, Takashi Tamura*, Bioscience, biotechnology, and biochemistry 80(3) 600-9 (2016)

2015

  1. Draft Genome Sequence of Streptomyces incarnatus NRRL8089, which Produces the Nucleoside Antibiotic Sinefungin. Kenshiro Oshima, Masahira Hattori, Hitomi Shimizu, Koji Fukuda, Michiko Nemoto, Kenji Inagaki, Takashi Tamura*, Genome announcements 3(4) (2015)
  2. Oil accumulation by the oleaginous diatom Fistulifera solaris as revealed by the genome and transcriptome. Tsuyoshi Tanaka*, Yoshiaki Maeda, Alaguraj Veluchamy, Michihiro Tanaka, Heni Abida, Eric Maréchal, Chris Bowler, Masaki Muto, Yoshihiko Sunaga, Masayoshi Tanaka, Tomoko Yoshino, Takeaki Taniguchi, Yorikane Fukuda, Michiko Nemoto, Mitsufumi Matsumoto, Pui Shan Wong, Sachiyo Aburatani, Wataru Fujibuchi, The Plant cell 27(1) 162-76 (2015)

2014

  1. Morphological and molecular phylogenetic analysis of the high triglyceride-producing marine diatom, Fistulifera solaris sp nov (Bacillariophyceae). Mitsufumi Matsumoto, Shigeki Mayama, Michiko Nemoto, Yorikane Fukuda, Masaki Muto, Tomoko Yoshino, Tadashi Matsunaga, Tsuyoshi Tanaka*, PHYCOLOGICAL RESEARCH 62(4) 257-268 (2014)
  2. Identification of a frustule-associated protein of the marine pennate diatom Fistulifera sp. strain JPCC DA0580. Michiko Nemoto, Yoshiaki Maeda, Masaki Muto, Masayoshi Tanaka, Tomoko Yoshino, Shigeki Mayama, Tsuyoshi Tanaka*, Marine genomics 16 39-44 (2014)
  3. 2030年への挑戦"藻類を燃料に 田中剛, 根本 理子, 吉野知子, 太陽エネルギー 39 27-35 2014年1月

2013

  1. Proteomics analysis of oil body-associated proteins in the oleaginous diatom. Daisuke Nojima, Tomoko Yoshino, Yoshiaki Maeda, Masayoshi Tanaka, Michiko Nemoto, Tsuyoshi Tanaka*, Journal of proteome research 12(11) 5293-301 (2013)
  2. Phase Transformations and Structural Developments in the Radular Teeth of Cryptochiton Stelleri. Qianqian Wang, Michiko Nemoto, Dongsheng Li, James C. Weaver, Brian Weden, John Stegemeier, Krassimir N. Bozhilov, Leslie R. Wood, Garrett W. Milliron, Christopher S. Kim, Elaine DiMasi, David Kisailus*, ADVANCED FUNCTIONAL MATERIALS 23(23) 2908-2917 (2013)
  3. A process design and productivity evaluation for oil production by indoor mass cultivation of a marine diatom, Fistulifera sp. JPCC DA0580. Akira Satoh*, Kyonosuke Ichii, Mitsufumi Matsumoto, Chihiro Kubota, Michiko Nemoto, Masayoshi Tanaka, Tomoko Yoshino, Tadashi Matsunaga, Tsuyoshi Tanaka, Bioresource technology 137 132-8 (2013)
  4. Molecular Bioengineering of Magnetosomes for Biotechnological Applications. Atsushi Arakaki, Michiko Nemoto, Tadashi Matsunaga, Coordination Chemistry in Protein Cages: Principles, Design, and Applications 241-271 (2013)
  5. Establishment of a genetic transformation system for the marine pennate diatom Fistulifera sp. strain JPCC DA0580--a high triglyceride producer. Masaki Muto, Yorikane Fukuda, Michiko Nemoto, Tomoko Yoshino, Tadashi Matsunaga, Tsuyoshi Tanaka*Marine biotechnology (New York, N.Y.) 15(1) 48-55 (2013)

2012

  1. Proteomic analysis from the mineralized radular teeth of the giant Pacific chiton, Cryptochiton stelleri (Mollusca). Michiko Nemoto, Qianqian Wang, Dongsheng Li, Songqin Pan, Tadashi Matsunaga, David Kisailus*, Proteomics 12(18) 2890-4 (2012)
  2. Assessment of the anti-biofouling potentials of a copper iodide-doped nylon mesh. Tetsuya Sato, Yoshie Fujimori, Tsuruo Nakayama, Yasuo Gotoh, Yoshihiko Sunaga, Michiko Nemoto, Tadashi Matsunaga, Tsuyoshi Tanaka*, Applied microbiology and biotechnology 95(4) 1043-50 (2012)
  3. Investigation of the antiviral properties of copper iodide nanoparticles against feline calicivirus. Nozomi Shionoiri, Tetsuya Sato, Yoshie Fujimori, Tsuruo Nakayama, Michiko Nemoto, Tadashi Matsunaga, Tsuyoshi Tanaka* Journal of bioscience and bioengineering 113(5) 580-6 (2012)
  4. Prevention of marine biofouling on nylon mesh doped with silver iodide. Tetsuya Sato, Yoshie Fujimori, Tsuruo Nakayama, Yasuo Gotoh, Michiko Nemoto, Tadashi Matsunaga, Tsuyoshi Tanaka*, COLLOIDS AND SURFACES A-PHYSICOCHEMICAL AND ENGINEERING ASPECTS 396 41-45 (2012)

2011

  1. 次世代液体バイオ燃料開発に向けた海洋生物資源の活用 田中剛, 根本理子, 松永是, ケミカルエンジニアリング 56(9) 713-718 2011年9月 

2009

  1. Proteomic analysis of irregular, bullet-shaped magnetosomes in the sulphate-reducing magnetotactic bacterium Desulfovibrio magneticus RS-1. Tadashi Matsunaga*, Michiko Nemoto, Atsushi Arakari, Masayoshi Tanaka, Proteomics 9(12) 3341-52 (2009)

2008

  1. Formation of magnetite by bacteria and its application. Atsushi Arakaki, Hidekazu Nakazawa, Michiko Nemoto, Tetsushi Mori, Tadashi Matsunaga*, Journal of the Royal Society, Interface 5(26) 977-99 (2008)